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Work Avoidance

v2.9 and after

You can make workflows faster and more robust by employing work avoidance. A workflow that utilizes this is simply a workflow containing steps that do not run if the work has already been done. This simplest way to do this is to use marker files.

Use cases:

  • An expensive step appears across multiple workflows - you want to avoid repeating them.
  • A workflow has unreliable tasks - you want to be able to resubmit the workflow.

A marker file is a file that indicates the work has already been done. Before doing the work you check to see if the marker has already been done:

if [ -e /work/markers/name-of-task ]; then
    echo "work already done"
    exit 0
fi
echo "working very hard"
touch /work/markers/name-of-task

Choose a name for the file that is unique for the task, e.g. the template name and all the parameters:

touch /work/markers/$(date +%Y-%m-%d)-echo-{{inputs.parameters.num}}

You need to store the marker files between workflows and this can be achieved using a PVC and optional input artifact.

This complete work avoidance example has the following:

  • A PVC to store the markers on.
  • A load-markers step that loads the marker files from artifact storage.
  • Multiple echo tasks that avoid work using marker files.
  • A save-markers exit handler to save the marker files, even if they are not needed.

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